Editor's Foreword ............................................ XIII
Preface ........................................................ XV
Chapter 1. Introduction ......................................... 1
Setting the scene ............................................... 1
Biogeochemistry and geobotany ................................... 1
General considerations and distinctions ...................... 1
History of geobotany ......................................... 4
History of biogeochemistry ................................... 5
Plant evolution and chemistry .................................. 10
Barrier mechanisms ............................................. 17
Chapter 2. Plant Function, Chemistry and Mineralogy ............ 21
Plant requirements ............................................. 21
Element uptake and function .................................... 24
Root form and controls on element uptake ....................... 27
Summary comments on chemical requirements of plants ............ 28
Mineralogy of plants ........................................... 30
Chapter 3. Field Guide 1: Climatic and Geographic Zones ........ 37
Selection of plant species ..................................... 37
Orientation ................................................. 38
Boreal (northern) forest .................................... 42
Black spruce ............................................. 44
Balsam fir ............................................... 47
Alder .................................................... 48
Temperate coniferous forest ................................. 49
Temperate deciduous forest .................................. 50
Tundra ...................................................... 51
Arid and semi-arid environments - general comments .......... 52
North America - arid and semi-arid .......................... 52
Northern basin and range ................................. 52
Southern basin and range, and desert of the
southwestern USA and Mexico .............................. 52
Central America ............................................. 53
North Africa-arid - southern Morocco into the Sahara
Desert ...................................................... 53
Mediterranean coast ......................................... 53
Middle East - from Turkey and Armenia, through Saudi
Arabia to Pakistan, and Africa east of the Sahara ........... 54
Central, West and South Africa .............................. 54
India ....................................................... 55
China, Mongolia and Japan ................................... 56
Australia ................................................... 57
South America (excluding the Amazon) ........................ 58
Humid tropics - Amazon, West Africa, Indonesia .............. 59
Summary notes .................................................. 60
Chapter 4. Field Guide 2: Sample Selection and Collection ...... 63
General considerations ......................................... 63
Seasonal variations ......................................... 66
Summary considerations of seasonal variations -
a practical approach ........................................ 72
Selection of tissue type ....................................... 73
Element differences among plant species ..................... 74
The inhomogeneity of trees .................................. 77
Bark ........................................................ 81
Twigs ....................................................... 85
Foliage ..................................................... 86
Trunk wood .................................................. 89
Treetops .................................................... 90
Cones ....................................................... 96
Stunted trees of the Tundra ................................. 97
LFH/forest litter/humus ..................................... 99
Flowers, seeds, spores and pollen .......................... 100
Summary ....................................................... 102
Sample collection ............................................. 106
Precautions ................................................ 106
Field accessories .......................................... 109
Sample bags ................................................ 1ll
Sample size ................................................ 113
Samples required for quality control ....................... 113
Checklist for vegetation sample collection and site
observations ............................................... 114
Field drying and shipping .................................. 116
Alternative samples ........................................... 116
Saps ....................................................... 116
Fungi ...................................................... 119
Moss ....................................................... 120
Seaweed .................................................... 122
Geozoology ................................................. 124
Chapter 5. Survey Design and Comparisons with Other Sample
Media .............................................. 127
Introduction .................................................. 127
Survey design ................................................. 129
Scale of survey ............................................... 130
Low density (1 site per 10 km2 or greater) -
Reconnaissance level ....................................... 130
Moderate density (1 site per 1-10 km2) ..................... 134
Semi-detailed surveys (1 site per 0.25-1 km2) .............. 136
Detailed surveys (25-200 m spacing) ........................ 139
Comparisons with other types of geochemical survey ............ 143
Vegetation versus Soils .................................... 144
Vegetation versus Glacial Tills ............................ 146
Comparison of multi-media reconnaissance-level surveys
using plants, soils, and sediments from lakes and
streams .................................................... 148
Summary ....................................................... 149
Chapter 6. Sample Preparation and Decomposition ............... 151
Introduction .................................................. 151
Washing ....................................................... 151
Thorough washing using solvents or dispersants ............. 151
Washing in water ........................................... 154
Particle and sample size ...................................... 159
Sample decomposition .......................................... 163
Dry ashing .................................................... 165
Element volatilization ..................................... 165
Dry ashing - the realities ................................. 169
A special case: Vegetation from sites near smelters or
other sites of point-source metal emissions ................... 174
Wet decomposition ............................................. 178
Microwave digestion ........................................... 179
Selective leaching ............................................ 180
Fusions ....................................................... 185
Standard reference materials and analytical controls .......... 186
Summary ....................................................... 189
Chapter 7. Plant Analysis ..................................... 191
'Fit for purpose' ............................................. 192
Analytical techniques ......................................... 194
Analytical instrumentation .................................... 196
Atomic absorption spectrometry ............................. 196
Inductively coupled plasma emission spectrometry
(ICP-ES) ................................................... 197
Inductively coupled plasma mass spectrometry (ICP-MS) ...... 200
Instrumental neutron activation analysis (INAA) ............ 204
X-ray fluorescence (XRF) ................................... 208
Summary ....................................................... 209
Chapter 8. The Eden Project - Source of a Biogeochemical
Database ........................................... 213
Introduction .................................................. 213
Samples in the collection ..................................... 213
Soil in the biomes ............................................ 214
Foliage collection from the biomes ............................ 215
Chapter 9. Biogeochemical Behaviour of the Elements ........... 229
Introduction .................................................. 229
The importance of data quality ................................ 229
Elements in plants and their relevance to mineral
exploration ................................................... 231
Aluminium (Al) ............................................. 232
Antimony (Sb) .............................................. 233
Arsenic (As) ............................................... 234
Barium (Ba) ................................................ 236
Beryllium (Be) ............................................. 237
Bismuth (Bi) ............................................... 239
Boron (B) .................................................. 240
Bromine (Br) ............................................... 241
Cadmium (Cd) ............................................... 242
Calcium (Ca) ............................................... 243
Cerium (Ce) ................................................ 244
Cesium (Cs) ................................................ 245
Chromium (Cr) .............................................. 246
Chlorine (CI) .............................................. 248
Cobalt (Co) ................................................ 248
Copper (Cu) ................................................ 249
Dysprosium (Dy) ............................................ 250
Erbium (Er) ................................................ 250
Europium (Eu) .............................................. 251
Fluorine (F) ............................................... 251
Gadolinium (Gd) ............................................ 251
Gallium (Ga) ............................................... 251
Germanium (Ge) ............................................. 252
Gold (Au) .................................................. 253
Hafnium (HO ................................................ 257
Halogens (F, Br, CI and I) ................................. 258
Holmium (Ho) ............................................... 259
Indium (In) ................................................ 259
Iodine (I) ................................................. 259
Iridium (Ir) ............................................... 259
Iron (Fe) .................................................. 259
Lanthanum (La), the rare earth elements (REE) and
yttrium (Y) ................................................ 260
Lead (Pb) .................................................. 264
Lithium (Li) ............................................... 266
Lutetium (Lu) .............................................. 267
Magnesium (Mg) ............................................. 267
Manganese (Mn) ............................................. 268
Mercury (Hg) ............................................... 269
Molybdenum (Mo) ............................................ 275
Neodymium (Nd) ............................................. 278
Nickel (Ni) ................................................ 279
Niobium (Nb) ............................................... 282
Osmium (Os) ................................................ 283
Palladium (Pd) ............................................. 283
Phosphorus (P) ............................................. 283
Platinum (Pt) and the platinum group elements (PGEs)
-palladium (Pd), iridium (Ir), osmium (Os), rhodium
(Rh) and ruthenium (Ru) .................................... 285
Praseodymium (Pr) .......................................... 290
Promethium (Pm) ............................................ 290
Potassium (K) .............................................. 291
Radium (Ra) ................................................ 291
Rhenium (Re) ............................................... 292
Rhodium (Rh) ............................................... 295
Rubidium (Rb) .............................................. 295
Ruthenium (Ru) ............................................. 296
Samarium (Sm) .............................................. 296
Scandium (Sc) .............................................. 297
Selenium (Se) .............................................. 298
Silver (Ag) ................................................ 299
Sodium (Na) ................................................ 302
Strontium (Sr) ............................................. 303
Sulphur (S) ................................................ 304
Tantalum (Та) .............................................. 306
Tellurium (Те) ............................................. 308
Terbium (Tb) ............................................... 310
Thallium (Tl) .............................................. 310
Thorium (Th) ............................................... 312
Thulium (Tm) ............................................... 314
Tin(Sn) .................................................... 314
Titanium (Ti) .............................................. 316
Tungsten (W) ............................................... 316
Uranium (U) ................................................ 317
Vanadium (V) ............................................... 320
Ytterbium (Yb) ............................................. 321
Yttrium (Y) ................................................ 321
Zinc (Zn) .................................................. 322
Zirconium (Zr) ............................................. 324
Chapter 10. Data Handling and Analysis ........................ 327
First estimation of the data .................................. 327
Computer software tools ....................................... 330
Data analysis ................................................. 331
Univariate statistics ...................................... 332
Bivariate statistics ....................................... 335
Multivariate analysis ...................................... 335
Map plots of data distributions ............................... 338
Unusual concentrations of selected elements ................... 339
Analytical artefacts ....................................... 339
Sampling and sample preparation artefacts .................. 340
Contamination of the natural environment ................... 340
Species-specific enrichments ............................... 341
Chapter 11. Case Histories .................................... 343
Gold .......................................................... 344
Canada: La Ronge and Glennie Domains, Northern
Saskatchewan ............................................... 344
Rod Zone - Jolu Mine - La Ronge
Domain .................................................. 344
Geology and mineralization ........................... 344
Biogeochemical survey ................................ 345
Post survey exploration .............................. 345
Jasper pond ............................................. 345
Geology and mineralization ........................... 345
Biogeochemical surveys ............................... 346
Post survey development .............................. 347
Seabee Mine, Laonil Lake ................................ 347
Geology and mineralization ........................... 347
Biogeochemical survey ................................ 348
Post survey developments ............................. 348
Canada: Temperate forest of British Columbia
QR (Quesnel River) deposit ........................... 349
Geology and mineralization ........................... 349
Environment .......................................... 349
Scope of survey and analysis ......................... 349
Results .............................................. 349
South America: Peru-Ecuador Border ............................ 350
Cordillera del Condor
Geology and mineralization .............................. 350
Environment ............................................. 351
Scope of survey and analysis ............................ 351
South America: Bolivia
and Argentina .............................................. 356
Geology and mineralization ........................... 356
Environment .......................................... 356
Biogeochemical surveys ............................... 356
Summary of results from the orientation surveys ...... 360
Platinum group metals/nickel/copper ........................... 361
Canada: Rottenstone Lake, northern Saskatchewan ............ 361
Geology and mineralization .............................. 361
Environment ............................................. 362
Exploration history ..................................... 362
Biogeochemical surveys .................................. 363
Post survey exploration ................................. 366
Summary notes ........................................... 366
Nickel ........................................................ 366
Canada: Thompson Nickel Belt, Northern Manitoba ............ 366
Geology and mineralization .............................. 366
Environment ............................................. 366
Biogeochemical survey ................................... 367
Post survey exploration ................................. 372
Uranium ....................................................... 373
Canada: Athabasca Basin, Northern Saskatchewan ............. 373
Geology and mineralization .............................. 373
Exploration history ..................................... 373
Environment ............................................. 374
Biogeochemical surveys .................................. 374
Subsequent discoveries .................................. 380
Summary notes ........................................... 381
Kimberlites ................................................... 381
Canada: Ekati Trend, Lac de Gras, Northwest Territories .... 381
Geology ................................................. 381
Environment ............................................. 382
Biogeochemical survey ................................... 382
South Africa: Kimberley .................................... 384
Geology ................................................. 384
Environment ............................................. 386
Biogeochemical surveys .................................. 386
Expanded surveys - summary observations ................. 387
Canada: Buffalo Head Hills, North-Central Alberta .......... 388
Geology ................................................. 388
Exploration history ..................................... 389
Environment ............................................. 390
Biogeochemical survey ................................... 390
Kimberlites - summary ...................................... 391
Chapter 12. Exploration Geomicrobiology - The New Frontier .... 393
Introduction .................................................. 393
Significance of micro-organisms as biogeochemical agents ...... 394
Methods for identifying micro-organisms and microbial
processes ..................................................... 397
Culture-dependent techniques ............................... 397
Culture-independent methods ................................ 399
Molecular procedures .......................................... 399
Extraction and purification of nucleic acids from soils .... 399
Amplification of target genes from extracted DNA or RNA ....... 400
Assessing genetic diversity ................................ 402
Genetic fingerprinting ..................................... 402
Case studies .................................................. 403
Case Study 1 - The geomicrobiological cycling of gold ...... 403
Case Study 2 - Microbial diversity in soils and sediments
contaminated with Zn and Cu ................................ 409
Case Study 3 - Bacterial biosensors as alternatives for
measuring heavy metals in soil extracts .................... 410
Future technologies for bio-prospecting ....................... 410
Conclusions ................................................... 413
Chapter 13. A Look to the Future .............................. 415
Introduction .................................................. 415
Hyperspectral imagery in relation to biogeochemistry .......... 415
Exploration geomicrobiology ................................... 417
Forensic biogeochemistry ...................................... 417
Plant mineralogy .............................................. 418
Chemical analysis ............................................. 418
Concluding remarks ............................................ 419
References .................................................... 421
Botanical Index ............................................... 451
Subject Index ................................................. 455
Contents of CD ................................................ 461
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