Section I. Measurements
1. Comparison of Biological Scale Resolution from CTD
and Microstructure Measurements ............................. 3
Fabian Wolk, Laurent Seuront, Hidekatsu Yamazaki, and
Sophie Leterme
2. Measurement of Zooplankton Distributions with a
High-Resolution Digital Camera System ...................... 17
Mark C. Benfield, Christopher J. Schwehm, Rodney G.
Fredericks, Gregory Squyres, Sean F. Keenan, and
Mark V. Trevorrow
3. Planktonic Layers: Physical and Biological Interactions
on the Small Scale ......................................... 31
Timothy J. Cowles
4. Scales of Biological-Physical Coupling in the Equatorial
Pacific .................................................... 51
Peter G. Strutton and Francisco P. Chavez
5. Acoustic Remote Sensing of Photosynthetic Activity in
Seagrass Beds .............................................. 65
Jean-Pierre Hermand
6. Multiscale in Situ Measurements of Intertidal
Benthic Production and Respiration ......................... 97
Dominique Davoult, Aline Migné, and Nicolas Spilmont
7. Spatially Extensive, High Resolution Images of Rocky
Shore Communities ......................................... 109
David R. Blakeway, Carlos D. Robles, David A.
Fuentes, and Hong-Lie Qiu
8. Food Web Dynamics in Stable Isotope Ecology: Time
Integration of Different Trophic Levels ................... 125
Catherine M. O'Reilly, Pieter Verburg, Robert E. Hecky,
Pierre-Denis Plisnier, and Andrew S. Cohen
9. Synchrotron-Based Infrared Imaging of Euglena gracilis
Single Cells .............................................. 135
Carol J. Hirschmugl, Maria Bunta, and Mario Giordano
10. Signaling during Mating in the Pelagic Copepod, Tentora
longicornis ............................................... 149
Jeannette Yen, Anne C. Prusak, Michael Caun,
Michael Doall, Jason Brown, and J. Rudi Strickler
11. Experimental Validation of an Individual-Based Model
for Zooplankton Swarming .................................. 161
Neil S. Banas, Dong-Ping Wang, and Jeannette Yen
Section II. Analysis
12. On Skipjack Tuna Dynamics: Similarity at Several Scales ... 183
Aldo P. Solari, Jose Juan Castro, and Carlos Bas
13. The Temporal Scaling of Environmental Variability in
Rivers and Lakes .......................................... 201
Hèléne Cyr, Peter J. Dillon, and Julie E. Parker
14. Biogeochemical Variability at the Sea Surface:
How It Is Linked to Process Response Times ................ 215
Amala Mahadevan and Janet W. Campbell
15. Challenges in the Analysis and Simulation of Benthic
Community Patterns ........................................ 229
Mark P. Johnson
16. Fractal Dimension Estimation in Studies of Epiphytal
and Epilithic Communities: Strengths and Weaknesses ....... 245
John Davenport
17. Rank-Size Analysis and Vertical Phytoplankton
Distribution Patterns ..................................... 257
James G. Mitchell
18. An Introduction to Wavelets ............................... 279
Igor M. Dremin, Oleg V. Ivanov,
Vladimir A. Nechitailo
19. Fractal Characterization of Local Hydrographic and
Biological Scales of Patchiness on Georges Bank ........... 297
Karen E. Fisher, Peter H. Wiebe, and Bruce D. Malamud
20. Orientation of Sea Fans Perpendicular to the Flow ......... 321
Thomas Osborn and Gary K. Ostrander
21. Why Are Large, Delicate, Gelatinous Organisms So
Successful in the Ocean's Interior? ....................... 329
Thomas Osborn and Richard T. Barber
22. Quantifying Zooplankton Swimming Behavior: The Question
of Scale .................................................. 333
Laurent Seuront, Matthew C. Brewer, and
J. Rudi Strickler
23. Identification of Interactions in Copepod Populations
Using a Qualitative Study of Stage-Structured
Population Models ......................................... 361
Sami Souissi and Olivier Bernard
Section III. Simulation
24. The Importance of Spatial Scale in the Modeling
of Aquatic Ecosystems ..................................... 383
Donald L. DeAngelis, Wolf M. Mooij,
and Alberto Basset
25. Patterns in Models of Plankton Dynamics in a
Heterogeneous Environment ................................. 401
Horst Malchow, Alexander B. Medvinsky, and Sergei V.
Petrovskii
26. Seeing the Forest for the Trees, and Vice Versa:
Pattern-Oriented Ecological Modeling ...................... 411
Volker Grimm and Uta Berger
27. Spatial Dynamics of a Benthic Community: Applying
Multiple Models to a Single System ........................ 429
Douglas D. Donalson, Robert A. Desharnais, Carlos D.
Robles, and Roger M. Nisbet
28. The Effects of Langmuir Circulation on Buoyant
Particles ................................................. 445
Eric D. Skyllingstad
29. Modeling of Turbulent Intermittency: Multifractal
Stochastic Processes and Their Simulation ................. 453
François G. Schmitt
30. An Application of the Lognormal Theory to Moderate
Reynolds Number Turbulent Structures ...................... 469
Hidekatsu Yamazaki and Kyle D. Squires
31. Numerical Simulation of the Flow Field at the Scale Size
of an Individual Copepod .................................. 479
Houshuo Jiang
32. Can Turbulence Reduce the Energy Costs of Hovering
for Planktonic Organisms? ................................. 493
Hidekatsu Yamazaki, Kyle D. Squires,
and J. Rudi Strickler
33. Utilizing Different Levels of Adaptation in
Individual-Based Modeling ................................. 507
Geir Huse and Jarl Giske
34. Using MultiAgent Systems to Develop Individual-Based
Models for Copepods: Consequences of Individual
Behavior and Spatial Heterogeneity on the Emerging
Properties at the Population Scale ........................ 523
Sami Souissi, Vincent Ginot, Laurent Seuront,
and Shin-Ichi Uye
35. Modeling Planktonic Behavior as a Complex Adaptive
System .................................................... 543
Atsuko K. Yamazaki and Daniel Kamykowski
36. Discrete Events-Based Lagrangian Approach as a Tool
for Modeling Predator-Prey Interactions in the Plankton ... 559
Philippe Caparroy
Index ......................................................... 575
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